Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SfswapQ3USH5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SfswapQ3USH5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SfswapQ3USH5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SfswapQ3USH5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SfswapQ3USH5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SfswapQ3USH5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SfswapQ3USH5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SfswapQ3USH5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SfswapQ3USH5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SfswapQ3USH5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SfswapQ3USH5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SfswapQ3USH5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.78■■□□□ 1.4
SfswapQ3USH5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SfswapQ3USH5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SfswapQ3USH5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SfswapQ3USH5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SfswapQ3USH5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
SfswapQ3USH5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
SfswapQ3USH5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SfswapQ3USH5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.76■■□□□ 1.39
SfswapQ3USH5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SfswapQ3USH5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SfswapQ3USH5 Gm11421-201ENSMUST00000122124 294 ntBASIC23.75■■□□□ 1.39
SfswapQ3USH5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
SfswapQ3USH5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SfswapQ3USH5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SfswapQ3USH5 Gm10493-201ENSMUST00000097270 612 ntBASIC23.75■■□□□ 1.39
SfswapQ3USH5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.75■■□□□ 1.39
SfswapQ3USH5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SfswapQ3USH5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SfswapQ3USH5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.75■■□□□ 1.39
SfswapQ3USH5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SfswapQ3USH5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SfswapQ3USH5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SfswapQ3USH5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SfswapQ3USH5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SfswapQ3USH5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SfswapQ3USH5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SfswapQ3USH5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SfswapQ3USH5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SfswapQ3USH5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SfswapQ3USH5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SfswapQ3USH5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SfswapQ3USH5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SfswapQ3USH5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SfswapQ3USH5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SfswapQ3USH5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SfswapQ3USH5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.7■■□□□ 1.39
SfswapQ3USH5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.7■■□□□ 1.38
SfswapQ3USH5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SfswapQ3USH5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.7■■□□□ 1.38
SfswapQ3USH5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.7■■□□□ 1.38
SfswapQ3USH5 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.7■■□□□ 1.38
SfswapQ3USH5 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.7■■□□□ 1.38
SfswapQ3USH5 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.7■■□□□ 1.38
SfswapQ3USH5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.7■■□□□ 1.38
SfswapQ3USH5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SfswapQ3USH5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
SfswapQ3USH5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.7■■□□□ 1.38
SfswapQ3USH5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SfswapQ3USH5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SfswapQ3USH5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SfswapQ3USH5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SfswapQ3USH5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SfswapQ3USH5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SfswapQ3USH5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SfswapQ3USH5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SfswapQ3USH5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms