Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col10a1Q05306 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col10a1Q05306 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.34■□□□□ 0.53
Col10a1Q05306 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col10a1Q05306 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col10a1Q05306 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col10a1Q05306 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.34■□□□□ 0.53
Col10a1Q05306 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.34■□□□□ 0.53
Col10a1Q05306 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col10a1Q05306 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col10a1Q05306 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Col10a1Q05306 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col10a1Q05306 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col10a1Q05306 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col10a1Q05306 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col10a1Q05306 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col10a1Q05306 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col10a1Q05306 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Col10a1Q05306 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.33■□□□□ 0.52
Col10a1Q05306 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.33■□□□□ 0.52
Col10a1Q05306 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col10a1Q05306 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col10a1Q05306 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col10a1Q05306 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col10a1Q05306 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col10a1Q05306 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col10a1Q05306 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col10a1Q05306 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.32■□□□□ 0.52
Col10a1Q05306 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col10a1Q05306 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col10a1Q05306 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col10a1Q05306 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col10a1Q05306 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col10a1Q05306 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col10a1Q05306 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Gm43137-201ENSMUST00000198052 594 ntBASIC18.31■□□□□ 0.52
Col10a1Q05306 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col10a1Q05306 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Col10a1Q05306 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col10a1Q05306 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col10a1Q05306 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col10a1Q05306 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
Col10a1Q05306 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.3■□□□□ 0.52
Col10a1Q05306 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col10a1Q05306 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.3■□□□□ 0.52
Col10a1Q05306 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Col10a1Q05306 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col10a1Q05306 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col10a1Q05306 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col10a1Q05306 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.29■□□□□ 0.52
Col10a1Q05306 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Gm12821-201ENSMUST00000120022 600 ntBASIC18.29■□□□□ 0.52
Col10a1Q05306 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col10a1Q05306 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.29■□□□□ 0.52
Col10a1Q05306 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.29■□□□□ 0.52
Col10a1Q05306 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Col10a1Q05306 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.29■□□□□ 0.52
Col10a1Q05306 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col10a1Q05306 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col10a1Q05306 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col10a1Q05306 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.28■□□□□ 0.52
Col10a1Q05306 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col10a1Q05306 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col10a1Q05306 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col10a1Q05306 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.28■□□□□ 0.52
Col10a1Q05306 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col10a1Q05306 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col10a1Q05306 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col10a1Q05306 Gm27454-201ENSMUST00000185090 204 ntBASIC18.27■□□□□ 0.52
Col10a1Q05306 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col10a1Q05306 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.27■□□□□ 0.52
Col10a1Q05306 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col10a1Q05306 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col10a1Q05306 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col10a1Q05306 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col10a1Q05306 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col10a1Q05306 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.27■□□□□ 0.51
Col10a1Q05306 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col10a1Q05306 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col10a1Q05306 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col10a1Q05306 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col10a1Q05306 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.26■□□□□ 0.51
Col10a1Q05306 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.26■□□□□ 0.51
Col10a1Q05306 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms