Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fen1P39749 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Fen1P39749 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fen1P39749 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.93■□□□□ 0.78
Fen1P39749 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fen1P39749 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fen1P39749 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fen1P39749 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Fen1P39749 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fen1P39749 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Fen1P39749 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fen1P39749 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fen1P39749 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.92■□□□□ 0.78
Fen1P39749 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fen1P39749 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Fen1P39749 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fen1P39749 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Fen1P39749 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fen1P39749 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fen1P39749 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fen1P39749 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fen1P39749 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fen1P39749 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fen1P39749 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Fen1P39749 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fen1P39749 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.91■□□□□ 0.78
Fen1P39749 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fen1P39749 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Fen1P39749 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fen1P39749 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fen1P39749 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Fen1P39749 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Fen1P39749 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.9■□□□□ 0.78
Fen1P39749 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Fen1P39749 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Fen1P39749 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fen1P39749 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fen1P39749 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fen1P39749 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fen1P39749 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fen1P39749 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.78
Fen1P39749 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Fen1P39749 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.89■□□□□ 0.77
Fen1P39749 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.89■□□□□ 0.77
Fen1P39749 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fen1P39749 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fen1P39749 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Fen1P39749 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fen1P39749 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fen1P39749 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fen1P39749 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Fen1P39749 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fen1P39749 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Fen1P39749 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
Fen1P39749 Gm5921-201ENSMUST00000075898 882 ntBASIC19.88■□□□□ 0.77
Fen1P39749 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Fen1P39749 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fen1P39749 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fen1P39749 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fen1P39749 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fen1P39749 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Fen1P39749 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fen1P39749 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fen1P39749 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.87■□□□□ 0.77
Fen1P39749 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.87■□□□□ 0.77
Fen1P39749 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Fen1P39749 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Fen1P39749 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fen1P39749 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fen1P39749 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Fen1P39749 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.86■□□□□ 0.77
Fen1P39749 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.86■□□□□ 0.77
Fen1P39749 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fen1P39749 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Fen1P39749 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fen1P39749 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fen1P39749 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.85■□□□□ 0.77
Fen1P39749 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.85■□□□□ 0.77
Fen1P39749 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fen1P39749 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fen1P39749 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fen1P39749 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.85■□□□□ 0.77
Fen1P39749 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fen1P39749 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fen1P39749 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fen1P39749 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Fen1P39749 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fen1P39749 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.84■□□□□ 0.77
Fen1P39749 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Fen1P39749 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Fen1P39749 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms