Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnfrsf1aP25118 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tnfrsf1aP25118 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.63■□□□□ 0.25
Tnfrsf1aP25118 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1aP25118 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1aP25118 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1aP25118 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1aP25118 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1aP25118 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf1aP25118 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tnfrsf1aP25118 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf1aP25118 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 Notumos-201ENSMUST00000151998 2659 ntBASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 Gm9870-201ENSMUST00000063874 645 ntBASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf1aP25118 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf1aP25118 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1aP25118 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1aP25118 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf1aP25118 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf1aP25118 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1aP25118 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Tnfrsf1aP25118 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf1aP25118 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf1aP25118 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1aP25118 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1aP25118 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf1aP25118 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.57■□□□□ 0.24
Tnfrsf1aP25118 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.57■□□□□ 0.24
Tnfrsf1aP25118 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.57■□□□□ 0.24
Tnfrsf1aP25118 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms