Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Msh3P13705 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.05■■□□□ 1.12
Msh3P13705 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Msh3P13705 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh3P13705 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh3P13705 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.04■■□□□ 1.12
Msh3P13705 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Msh3P13705 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Msh3P13705 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh3P13705 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Msh3P13705 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh3P13705 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Msh3P13705 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Msh3P13705 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.03■■□□□ 1.12
Msh3P13705 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Msh3P13705 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.03■■□□□ 1.12
Msh3P13705 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Msh3P13705 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Msh3P13705 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.03■■□□□ 1.12
Msh3P13705 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
Msh3P13705 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Msh3P13705 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.03■■□□□ 1.12
Msh3P13705 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh3P13705 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.02■■□□□ 1.12
Msh3P13705 Gm21956-201ENSMUST00000179946 522 ntBASIC22.02■■□□□ 1.12
Msh3P13705 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.02■■□□□ 1.12
Msh3P13705 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh3P13705 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Msh3P13705 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
Msh3P13705 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.01■■□□□ 1.11
Msh3P13705 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Msh3P13705 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.01■■□□□ 1.11
Msh3P13705 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
Msh3P13705 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh3P13705 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh3P13705 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh3P13705 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh3P13705 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Msh3P13705 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22■■□□□ 1.11
Msh3P13705 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Msh3P13705 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh3P13705 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22■■□□□ 1.11
Msh3P13705 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh3P13705 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.99■■□□□ 1.11
Msh3P13705 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Msh3P13705 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh3P13705 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh3P13705 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Msh3P13705 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh3P13705 Notumos-201ENSMUST00000151998 2659 ntBASIC21.99■■□□□ 1.11
Msh3P13705 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Msh3P13705 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh3P13705 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Msh3P13705 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Msh3P13705 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.98■■□□□ 1.11
Msh3P13705 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Msh3P13705 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.98■■□□□ 1.11
Msh3P13705 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Msh3P13705 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Msh3P13705 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Msh3P13705 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Msh3P13705 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Msh3P13705 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Msh3P13705 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Msh3P13705 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh3P13705 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh3P13705 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.96■■□□□ 1.11
Msh3P13705 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh3P13705 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh3P13705 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Msh3P13705 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh3P13705 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh3P13705 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Msh3P13705 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Msh3P13705 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.95■■□□□ 1.1
Msh3P13705 Gm13241-201ENSMUST00000094493 780 ntBASIC21.95■■□□□ 1.1
Msh3P13705 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Msh3P13705 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.95■■□□□ 1.1
Msh3P13705 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Msh3P13705 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Msh3P13705 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Msh3P13705 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh3P13705 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh3P13705 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh3P13705 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Msh3P13705 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh3P13705 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Msh3P13705 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Msh3P13705 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh3P13705 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Msh3P13705 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.93■■□□□ 1.1
Msh3P13705 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Msh3P13705 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Msh3P13705 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh3P13705 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.92■■□□□ 1.1
Msh3P13705 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh3P13705 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh3P13705 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh3P13705 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh3P13705 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms