Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P04946 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
P04946 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.18■□□□□ 0.34
P04946 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
P04946 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.18■□□□□ 0.34
P04946 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
P04946 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.18■□□□□ 0.34
P04946 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.18■□□□□ 0.34
P04946 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.18■□□□□ 0.34
P04946 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P04946 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
P04946 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Gm11421-201ENSMUST00000122124 294 ntBASIC17.17■□□□□ 0.34
P04946 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.17■□□□□ 0.34
P04946 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04946 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04946 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04946 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04946 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04946 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04946 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04946 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
P04946 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
P04946 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
P04946 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.15■□□□□ 0.34
P04946 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
P04946 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04946 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
P04946 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04946 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04946 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04946 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.14■□□□□ 0.33
P04946 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P04946 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
P04946 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.14■□□□□ 0.33
P04946 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.13■□□□□ 0.33
P04946 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.13■□□□□ 0.33
P04946 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.13■□□□□ 0.33
P04946 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04946 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
P04946 Gm5874-201ENSMUST00000096101 508 ntBASIC17.12■□□□□ 0.33
P04946 Gm10493-201ENSMUST00000097270 612 ntBASIC17.12■□□□□ 0.33
P04946 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
P04946 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.12■□□□□ 0.33
P04946 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04946 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P04946 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04946 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
P04946 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.11■□□□□ 0.33
P04946 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P04946 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04946 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04946 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04946 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04946 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms