Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dnmt3aO88508 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dnmt3aO88508 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dnmt3aO88508 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Dnmt3aO88508 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dnmt3aO88508 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dnmt3aO88508 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dnmt3aO88508 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Dnmt3aO88508 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dnmt3aO88508 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dnmt3aO88508 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Dnmt3aO88508 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.92■□□□□ 0.78
Dnmt3aO88508 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dnmt3aO88508 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Dnmt3aO88508 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.91■□□□□ 0.78
Dnmt3aO88508 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Dnmt3aO88508 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dnmt3aO88508 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dnmt3aO88508 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dnmt3aO88508 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.9■□□□□ 0.78
Dnmt3aO88508 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Gm12821-201ENSMUST00000120022 600 ntBASIC19.9■□□□□ 0.78
Dnmt3aO88508 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.9■□□□□ 0.78
Dnmt3aO88508 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.9■□□□□ 0.78
Dnmt3aO88508 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dnmt3aO88508 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.9■□□□□ 0.78
Dnmt3aO88508 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Dnmt3aO88508 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dnmt3aO88508 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dnmt3aO88508 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Dnmt3aO88508 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Dnmt3aO88508 Mir6236-201ENSMUST00000184437 123 ntBASIC19.87■□□□□ 0.77
Dnmt3aO88508 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Dnmt3aO88508 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 Gm27454-201ENSMUST00000185090 204 ntBASIC19.86■□□□□ 0.77
Dnmt3aO88508 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Dnmt3aO88508 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dnmt3aO88508 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 165.6 ms