Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tspan6O70401 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tspan6O70401 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tspan6O70401 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tspan6O70401 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tspan6O70401 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Tspan6O70401 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tspan6O70401 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tspan6O70401 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.49■□□□□ 0.71
Tspan6O70401 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.49■□□□□ 0.71
Tspan6O70401 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tspan6O70401 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.49■□□□□ 0.71
Tspan6O70401 Gm18671-201ENSMUST00000214826 683 ntBASIC19.49■□□□□ 0.71
Tspan6O70401 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.49■□□□□ 0.71
Tspan6O70401 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tspan6O70401 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tspan6O70401 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tspan6O70401 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tspan6O70401 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tspan6O70401 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Tspan6O70401 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.48■□□□□ 0.71
Tspan6O70401 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tspan6O70401 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.48■□□□□ 0.71
Tspan6O70401 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tspan6O70401 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tspan6O70401 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tspan6O70401 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.47■□□□□ 0.71
Tspan6O70401 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Tspan6O70401 Gm42778-201ENSMUST00000199644 553 ntBASIC19.47■□□□□ 0.71
Tspan6O70401 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tspan6O70401 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tspan6O70401 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tspan6O70401 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan6O70401 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan6O70401 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tspan6O70401 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.46■□□□□ 0.71
Tspan6O70401 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan6O70401 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan6O70401 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tspan6O70401 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan6O70401 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tspan6O70401 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tspan6O70401 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tspan6O70401 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tspan6O70401 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tspan6O70401 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tspan6O70401 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.45■□□□□ 0.7
Tspan6O70401 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.45■□□□□ 0.7
Tspan6O70401 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.45■□□□□ 0.7
Tspan6O70401 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.45■□□□□ 0.7
Tspan6O70401 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tspan6O70401 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tspan6O70401 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan6O70401 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan6O70401 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan6O70401 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan6O70401 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tspan6O70401 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan6O70401 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tspan6O70401 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan6O70401 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tspan6O70401 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.43■□□□□ 0.7
Tspan6O70401 Gm10033-202ENSMUST00000211874 928 ntBASIC19.43■□□□□ 0.7
Tspan6O70401 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tspan6O70401 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tspan6O70401 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tspan6O70401 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.43■□□□□ 0.7
Tspan6O70401 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tspan6O70401 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tspan6O70401 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tspan6O70401 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tspan6O70401 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tspan6O70401 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tspan6O70401 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Tspan6O70401 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan6O70401 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan6O70401 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan6O70401 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tspan6O70401 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan6O70401 AV356131-201ENSMUST00000206201 750 ntBASIC19.41■□□□□ 0.7
Tspan6O70401 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan6O70401 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan6O70401 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan6O70401 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan6O70401 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan6O70401 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.4■□□□□ 0.7
Tspan6O70401 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.4■□□□□ 0.7
Tspan6O70401 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan6O70401 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan6O70401 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tspan6O70401 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan6O70401 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Tspan6O70401 Gm29257-201ENSMUST00000186115 639 ntBASIC19.4■□□□□ 0.7
Tspan6O70401 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan6O70401 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan6O70401 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan6O70401 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan6O70401 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.39■□□□□ 0.7
Tspan6O70401 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tspan6O70401 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms