Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Colca2F8VPY8 Gm10252-201ENSMUST00000209541 832 ntBASIC19.22■□□□□ 0.67
Colca2F8VPY8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Colca2F8VPY8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Colca2F8VPY8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Colca2F8VPY8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Colca2F8VPY8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Colca2F8VPY8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.21■□□□□ 0.67
Colca2F8VPY8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.2■□□□□ 0.66
Colca2F8VPY8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Colca2F8VPY8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colca2F8VPY8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colca2F8VPY8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colca2F8VPY8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.19■□□□□ 0.66
Colca2F8VPY8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.19■□□□□ 0.66
Colca2F8VPY8 Gm13146-201ENSMUST00000118508 780 ntBASIC19.19■□□□□ 0.66
Colca2F8VPY8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.19■□□□□ 0.66
Colca2F8VPY8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.19■□□□□ 0.66
Colca2F8VPY8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.19■□□□□ 0.66
Colca2F8VPY8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.19■□□□□ 0.66
Colca2F8VPY8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Colca2F8VPY8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.19■□□□□ 0.66
Colca2F8VPY8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.19■□□□□ 0.66
Colca2F8VPY8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Colca2F8VPY8 Gm13148-201ENSMUST00000118892 745 ntBASIC19.18■□□□□ 0.66
Colca2F8VPY8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Colca2F8VPY8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Colca2F8VPY8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Colca2F8VPY8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colca2F8VPY8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colca2F8VPY8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Colca2F8VPY8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.17■□□□□ 0.66
Colca2F8VPY8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Colca2F8VPY8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Colca2F8VPY8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colca2F8VPY8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Colca2F8VPY8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colca2F8VPY8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Colca2F8VPY8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Colca2F8VPY8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Colca2F8VPY8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Colca2F8VPY8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Colca2F8VPY8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Colca2F8VPY8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Colca2F8VPY8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Colca2F8VPY8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Colca2F8VPY8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.15■□□□□ 0.66
Colca2F8VPY8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.14■□□□□ 0.65
Colca2F8VPY8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Colca2F8VPY8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Colca2F8VPY8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Colca2F8VPY8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Colca2F8VPY8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.13■□□□□ 0.65
Colca2F8VPY8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.13■□□□□ 0.65
Colca2F8VPY8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
Colca2F8VPY8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Colca2F8VPY8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Colca2F8VPY8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Colca2F8VPY8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Colca2F8VPY8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Colca2F8VPY8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.13■□□□□ 0.65
Colca2F8VPY8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.12■□□□□ 0.65
Colca2F8VPY8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Colca2F8VPY8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.12■□□□□ 0.65
Colca2F8VPY8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Colca2F8VPY8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Colca2F8VPY8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Colca2F8VPY8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Colca2F8VPY8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.11■□□□□ 0.65
Colca2F8VPY8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.11■□□□□ 0.65
Colca2F8VPY8 Gm5408-201ENSMUST00000197998 747 ntBASIC19.11■□□□□ 0.65
Colca2F8VPY8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Colca2F8VPY8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Colca2F8VPY8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms