Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.99□□□□□ -0.01
Gm5878E9PUB3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gm5878E9PUB3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gm5878E9PUB3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm5878E9PUB3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gm5878E9PUB3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm5878E9PUB3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm5878E9PUB3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Gm5878E9PUB3 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm5878E9PUB3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Golph3-202ENSMUST00000226517 2359 ntBASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm5878E9PUB3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Gm5878E9PUB3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Gm5878E9PUB3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm5878E9PUB3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm5878E9PUB3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Gm7417-201ENSMUST00000192950 473 ntBASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm5878E9PUB3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm5878E9PUB3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm5878E9PUB3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm5878E9PUB3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm5878E9PUB3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Gm5878E9PUB3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.92□□□□□ -0.02
Gm5878E9PUB3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Gm5878E9PUB3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm5878E9PUB3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm5878E9PUB3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm5878E9PUB3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Gm5878E9PUB3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm5878E9PUB3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm5878E9PUB3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Gm5878E9PUB3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
Gm5878E9PUB3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.9□□□□□ -0.02
Gm5878E9PUB3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Gm5878E9PUB3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm5878E9PUB3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms