Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv3-4A0A140T8Q4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Igkv3-4A0A140T8Q4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv3-4A0A140T8Q4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv3-4A0A140T8Q4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Gm43545-201ENSMUST00000196765 2779 ntBASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv3-4A0A140T8Q4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igkv3-4A0A140T8Q4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms