Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.2■□□□□ 0.02
Trbv17A0A140T8P8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trbv17A0A140T8P8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv17A0A140T8P8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv17A0A140T8P8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv17A0A140T8P8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trbv17A0A140T8P8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms