Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir6236-201ENSMUST00000184437 123 ntBASIC17.47■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9870-201ENSMUST00000063874 645 ntBASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.46■□□□□ 0.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43530-201ENSMUST00000195920 274 ntBASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.44■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15820-201ENSMUST00000201566 728 ntBASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms