Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Trbv30A0A0B4J1P1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv30A0A0B4J1P1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv30A0A0B4J1P1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv30A0A0B4J1P1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv30A0A0B4J1P1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv30A0A0B4J1P1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv30A0A0B4J1P1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv30A0A0B4J1P1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv30A0A0B4J1P1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv30A0A0B4J1P1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms