Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.57■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv9-3A0A0B4J1J5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Mir6236-201ENSMUST00000184437 123 ntBASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Gm15039-201ENSMUST00000118914 875 ntBASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Ighv9-3A0A0B4J1J5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.53■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Notumos-201ENSMUST00000151998 2659 ntBASIC16.53■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Mir7075-201ENSMUST00000184187 82 ntBASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ighv9-3A0A0B4J1J5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ighv9-3A0A0B4J1J5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv9-3A0A0B4J1J5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms