Protein–RNA interactions for Protein: A0A087WR45

Prob1, Proline-rich basic protein 1, mousemouse

Predictions only

Length 1,010 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prob1A0A087WR45 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Prob1A0A087WR45 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.19■□□□□ 0.66
Prob1A0A087WR45 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Gm42778-201ENSMUST00000199644 553 ntBASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.19■□□□□ 0.66
Prob1A0A087WR45 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.18■□□□□ 0.66
Prob1A0A087WR45 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prob1A0A087WR45 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prob1A0A087WR45 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prob1A0A087WR45 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prob1A0A087WR45 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prob1A0A087WR45 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prob1A0A087WR45 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prob1A0A087WR45 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prob1A0A087WR45 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Prob1A0A087WR45 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prob1A0A087WR45 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prob1A0A087WR45 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.17■□□□□ 0.66
Prob1A0A087WR45 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prob1A0A087WR45 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prob1A0A087WR45 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Prob1A0A087WR45 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.16■□□□□ 0.66
Prob1A0A087WR45 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prob1A0A087WR45 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Prob1A0A087WR45 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prob1A0A087WR45 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prob1A0A087WR45 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Gm27011-201ENSMUST00000182352 972 ntBASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.15■□□□□ 0.66
Prob1A0A087WR45 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prob1A0A087WR45 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prob1A0A087WR45 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prob1A0A087WR45 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prob1A0A087WR45 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prob1A0A087WR45 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Gm9988-201ENSMUST00000069786 435 ntBASIC19.12■□□□□ 0.65
Prob1A0A087WR45 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prob1A0A087WR45 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prob1A0A087WR45 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prob1A0A087WR45 Gm13234-201ENSMUST00000120010 747 ntBASIC19.11■□□□□ 0.65
Prob1A0A087WR45 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.11■□□□□ 0.65
Prob1A0A087WR45 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Prob1A0A087WR45 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prob1A0A087WR45 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.11■□□□□ 0.65
Prob1A0A087WR45 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Prob1A0A087WR45 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prob1A0A087WR45 Reep4-203ENSMUST00000226563 1444 ntBASIC19.1■□□□□ 0.65
Prob1A0A087WR45 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prob1A0A087WR45 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prob1A0A087WR45 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms