Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Gm6211-202ENSMUST00000167849 925 ntBASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a4Q9QZR9 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.62■□□□□ 0.89
Col4a4Q9QZR9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a4Q9QZR9 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.62■□□□□ 0.89
Col4a4Q9QZR9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.62■□□□□ 0.89
Col4a4Q9QZR9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a4Q9QZR9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a4Q9QZR9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Col4a4Q9QZR9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a4Q9QZR9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Gm20049-201ENSMUST00000219950 730 ntBASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.61■□□□□ 0.89
Col4a4Q9QZR9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 Gm37856-201ENSMUST00000191634 999 ntBASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a4Q9QZR9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a4Q9QZR9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a4Q9QZR9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a4Q9QZR9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a4Q9QZR9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a4Q9QZR9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.59■□□□□ 0.89
Col4a4Q9QZR9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.59■□□□□ 0.89
Col4a4Q9QZR9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a4Q9QZR9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a4Q9QZR9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a4Q9QZR9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a4Q9QZR9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a4Q9QZR9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a4Q9QZR9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Col4a4Q9QZR9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a4Q9QZR9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a4Q9QZR9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Col4a4Q9QZR9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a4Q9QZR9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a4Q9QZR9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a4Q9QZR9 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.57■□□□□ 0.88
Col4a4Q9QZR9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a4Q9QZR9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a4Q9QZR9 Gm7977-201ENSMUST00000193787 748 ntBASIC20.56■□□□□ 0.88
Col4a4Q9QZR9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col4a4Q9QZR9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a4Q9QZR9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a4Q9QZR9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 Gm13146-201ENSMUST00000118508 780 ntBASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 Trmt13-210ENSMUST00000198454 880 ntBASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a4Q9QZR9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Mir6982-201ENSMUST00000184354 68 ntBASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.54■□□□□ 0.88
Col4a4Q9QZR9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a4Q9QZR9 Gm7290-201ENSMUST00000104990 617 ntBASIC20.53■□□□□ 0.88
Col4a4Q9QZR9 Gm12918-201ENSMUST00000120234 636 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms