Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9CR55 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Q9CR55 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.4■□□□□ 0.54
Q9CR55 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q9CR55 Gm16437-201ENSMUST00000025669 507 ntBASIC18.4■□□□□ 0.54
Q9CR55 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9CR55 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.4■□□□□ 0.54
Q9CR55 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9CR55 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Q9CR55 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9CR55 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9CR55 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Q9CR55 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Q9CR55 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9CR55 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9CR55 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9CR55 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9CR55 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.39■□□□□ 0.53
Q9CR55 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9CR55 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9CR55 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9CR55 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.38■□□□□ 0.53
Q9CR55 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Q9CR55 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Q9CR55 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.38■□□□□ 0.53
Q9CR55 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9CR55 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Q9CR55 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.37■□□□□ 0.53
Q9CR55 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.37■□□□□ 0.53
Q9CR55 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9CR55 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q9CR55 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.36■□□□□ 0.53
Q9CR55 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q9CR55 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Q9CR55 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.36■□□□□ 0.53
Q9CR55 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q9CR55 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q9CR55 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Q9CR55 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q9CR55 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CR55 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CR55 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.35■□□□□ 0.53
Q9CR55 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CR55 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CR55 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.35■□□□□ 0.53
Q9CR55 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CR55 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CR55 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Q9CR55 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
Q9CR55 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Q9CR55 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Q9CR55 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.34■□□□□ 0.53
Q9CR55 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.34■□□□□ 0.53
Q9CR55 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CR55 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q9CR55 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Q9CR55 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q9CR55 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Q9CR55 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Q9CR55 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CR55 Gm45364-201ENSMUST00000210883 159 ntBASIC18.33■□□□□ 0.52
Q9CR55 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CR55 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CR55 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CR55 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CR55 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CR55 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms