Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.51■□□□□ 0.39
Scrt1Q99M85 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Spcs1-204ENSMUST00000226782 949 ntBASIC17.51■□□□□ 0.39
Scrt1Q99M85 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scrt1Q99M85 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.49■□□□□ 0.39
Scrt1Q99M85 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scrt1Q99M85 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.48■□□□□ 0.39
Scrt1Q99M85 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scrt1Q99M85 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scrt1Q99M85 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scrt1Q99M85 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.47■□□□□ 0.39
Scrt1Q99M85 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Scrt1Q99M85 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Scrt1Q99M85 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.47■□□□□ 0.39
Scrt1Q99M85 Iqck-206ENSMUST00000208658 2891 ntBASIC17.47■□□□□ 0.39
Scrt1Q99M85 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scrt1Q99M85 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scrt1Q99M85 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scrt1Q99M85 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scrt1Q99M85 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.46■□□□□ 0.39
Scrt1Q99M85 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scrt1Q99M85 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.46■□□□□ 0.39
Scrt1Q99M85 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scrt1Q99M85 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scrt1Q99M85 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scrt1Q99M85 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scrt1Q99M85 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scrt1Q99M85 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Scrt1Q99M85 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Scrt1Q99M85 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scrt1Q99M85 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scrt1Q99M85 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scrt1Q99M85 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scrt1Q99M85 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scrt1Q99M85 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scrt1Q99M85 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scrt1Q99M85 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.44■□□□□ 0.38
Scrt1Q99M85 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scrt1Q99M85 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scrt1Q99M85 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.44■□□□□ 0.38
Scrt1Q99M85 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.43■□□□□ 0.38
Scrt1Q99M85 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
Scrt1Q99M85 Gm18671-201ENSMUST00000214826 683 ntBASIC17.43■□□□□ 0.38
Scrt1Q99M85 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
Scrt1Q99M85 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Scrt1Q99M85 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Scrt1Q99M85 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scrt1Q99M85 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms