Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap3Q99LM2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap3Q99LM2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdk5rap3Q99LM2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cdk5rap3Q99LM2 Gm7143-201ENSMUST00000222811 859 ntBASIC20.73■□□□□ 0.91
Cdk5rap3Q99LM2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cdk5rap3Q99LM2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdk5rap3Q99LM2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap3Q99LM2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap3Q99LM2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap3Q99LM2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cdk5rap3Q99LM2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap3Q99LM2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap3Q99LM2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap3Q99LM2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap3Q99LM2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap3Q99LM2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Gm40881-201ENSMUST00000223397 166 ntBASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap3Q99LM2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap3Q99LM2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap3Q99LM2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap3Q99LM2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap3Q99LM2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdk5rap3Q99LM2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap3Q99LM2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap3Q99LM2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap3Q99LM2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk5rap3Q99LM2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdk5rap3Q99LM2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk5rap3Q99LM2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk5rap3Q99LM2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdk5rap3Q99LM2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk5rap3Q99LM2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdk5rap3Q99LM2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk5rap3Q99LM2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap3Q99LM2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Cdk5rap3Q99LM2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk5rap3Q99LM2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.65■□□□□ 0.9
Cdk5rap3Q99LM2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdk5rap3Q99LM2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk5rap3Q99LM2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk5rap3Q99LM2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk5rap3Q99LM2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cdk5rap3Q99LM2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cdk5rap3Q99LM2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdk5rap3Q99LM2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cdk5rap3Q99LM2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap3Q99LM2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cdk5rap3Q99LM2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.64■□□□□ 0.89
Cdk5rap3Q99LM2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap3Q99LM2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.64■□□□□ 0.89
Cdk5rap3Q99LM2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap3Q99LM2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap3Q99LM2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap3Q99LM2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms