Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.25■□□□□ 0.99
Pcdhb2Q91Y00 Mir6236-201ENSMUST00000184437 123 ntBASIC21.25■□□□□ 0.99
Pcdhb2Q91Y00 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb2Q91Y00 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb2Q91Y00 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb2Q91Y00 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb2Q91Y00 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb2Q91Y00 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb2Q91Y00 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb2Q91Y00 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb2Q91Y00 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb2Q91Y00 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb2Q91Y00 Mir7075-201ENSMUST00000184187 82 ntBASIC21.21■□□□□ 0.99
Pcdhb2Q91Y00 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb2Q91Y00 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb2Q91Y00 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb2Q91Y00 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb2Q91Y00 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhb2Q91Y00 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhb2Q91Y00 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb2Q91Y00 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb2Q91Y00 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb2Q91Y00 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb2Q91Y00 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb2Q91Y00 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb2Q91Y00 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb2Q91Y00 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb2Q91Y00 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb2Q91Y00 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdhb2Q91Y00 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdhb2Q91Y00 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb2Q91Y00 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb2Q91Y00 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb2Q91Y00 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb2Q91Y00 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms