Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Gm7332-201ENSMUST00000118351 454 ntBASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Mmp28Q8CGV8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp28Q8CGV8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
Mmp28Q8CGV8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Gm12366-201ENSMUST00000121722 873 ntBASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Gm5786-201ENSMUST00000085368 882 ntBASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp28Q8CGV8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp28Q8CGV8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp28Q8CGV8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp28Q8CGV8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp28Q8CGV8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms