Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam228aQ8CDW1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam228aQ8CDW1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam228aQ8CDW1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam228aQ8CDW1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Fam228aQ8CDW1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Fam228aQ8CDW1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fam228aQ8CDW1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fam228aQ8CDW1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fam228aQ8CDW1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam228aQ8CDW1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam228aQ8CDW1 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.97■□□□□ 0.95
Fam228aQ8CDW1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fam228aQ8CDW1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fam228aQ8CDW1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Fam228aQ8CDW1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.95■□□□□ 0.94
Fam228aQ8CDW1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Fam228aQ8CDW1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.95■□□□□ 0.94
Fam228aQ8CDW1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam228aQ8CDW1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam228aQ8CDW1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam228aQ8CDW1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam228aQ8CDW1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.94■□□□□ 0.94
Fam228aQ8CDW1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fam228aQ8CDW1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Fam228aQ8CDW1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Fam228aQ8CDW1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fam228aQ8CDW1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Fam228aQ8CDW1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.93■□□□□ 0.94
Fam228aQ8CDW1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Gm45444-201ENSMUST00000211394 898 ntBASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Fam228aQ8CDW1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fam228aQ8CDW1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fam228aQ8CDW1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms