Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam78aQ8C552 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Fam78aQ8C552 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Fam78aQ8C552 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Fam78aQ8C552 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam78aQ8C552 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.39■■□□□ 1.01
Fam78aQ8C552 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam78aQ8C552 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Fam78aQ8C552 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam78aQ8C552 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam78aQ8C552 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.37■■□□□ 1.01
Fam78aQ8C552 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam78aQ8C552 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Fam78aQ8C552 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.37■■□□□ 1.01
Fam78aQ8C552 Gm42778-201ENSMUST00000199644 553 ntBASIC21.37■■□□□ 1.01
Fam78aQ8C552 AV356131-201ENSMUST00000206201 750 ntBASIC21.37■■□□□ 1.01
Fam78aQ8C552 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Fam78aQ8C552 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.37■■□□□ 1.01
Fam78aQ8C552 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam78aQ8C552 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Fam78aQ8C552 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.36■■□□□ 1.01
Fam78aQ8C552 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.36■■□□□ 1.01
Fam78aQ8C552 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam78aQ8C552 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam78aQ8C552 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam78aQ8C552 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam78aQ8C552 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam78aQ8C552 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.35■■□□□ 1.01
Fam78aQ8C552 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam78aQ8C552 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam78aQ8C552 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam78aQ8C552 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam78aQ8C552 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Fam78aQ8C552 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Fam78aQ8C552 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam78aQ8C552 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Fam78aQ8C552 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam78aQ8C552 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam78aQ8C552 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam78aQ8C552 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Fam78aQ8C552 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.33■■□□□ 1.01
Fam78aQ8C552 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam78aQ8C552 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam78aQ8C552 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam78aQ8C552 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam78aQ8C552 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Fam78aQ8C552 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.32■■□□□ 1
Fam78aQ8C552 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.32■■□□□ 1
Fam78aQ8C552 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.32■■□□□ 1
Fam78aQ8C552 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.32■■□□□ 1
Fam78aQ8C552 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam78aQ8C552 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam78aQ8C552 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.31■■□□□ 1
Fam78aQ8C552 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam78aQ8C552 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam78aQ8C552 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam78aQ8C552 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam78aQ8C552 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam78aQ8C552 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam78aQ8C552 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.3■■□□□ 1
Fam78aQ8C552 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fam78aQ8C552 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Fam78aQ8C552 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam78aQ8C552 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Fam78aQ8C552 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Fam78aQ8C552 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Fam78aQ8C552 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Fam78aQ8C552 Gm9988-201ENSMUST00000069786 435 ntBASIC21.29■■□□□ 1
Fam78aQ8C552 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam78aQ8C552 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms