Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.05■■□□□ 1.28
Scfd1Q8BRF7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scfd1Q8BRF7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scfd1Q8BRF7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
Scfd1Q8BRF7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Scfd1Q8BRF7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Scfd1Q8BRF7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Scfd1Q8BRF7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Gm10493-201ENSMUST00000097270 612 ntBASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scfd1Q8BRF7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scfd1Q8BRF7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scfd1Q8BRF7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scfd1Q8BRF7 Gm11421-201ENSMUST00000122124 294 ntBASIC23.03■■□□□ 1.28
Scfd1Q8BRF7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scfd1Q8BRF7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scfd1Q8BRF7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Scfd1Q8BRF7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.02■■□□□ 1.28
Scfd1Q8BRF7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Scfd1Q8BRF7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Scfd1Q8BRF7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Scfd1Q8BRF7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scfd1Q8BRF7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scfd1Q8BRF7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scfd1Q8BRF7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scfd1Q8BRF7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Scfd1Q8BRF7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.01■■□□□ 1.27
Scfd1Q8BRF7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scfd1Q8BRF7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23■■□□□ 1.27
Scfd1Q8BRF7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Scfd1Q8BRF7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scfd1Q8BRF7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Scfd1Q8BRF7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scfd1Q8BRF7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Scfd1Q8BRF7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Scfd1Q8BRF7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.97■■□□□ 1.27
Scfd1Q8BRF7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.96■■□□□ 1.27
Scfd1Q8BRF7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scfd1Q8BRF7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scfd1Q8BRF7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Scfd1Q8BRF7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scfd1Q8BRF7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.95■■□□□ 1.26
Scfd1Q8BRF7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scfd1Q8BRF7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scfd1Q8BRF7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scfd1Q8BRF7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Scfd1Q8BRF7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Scfd1Q8BRF7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Scfd1Q8BRF7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Scfd1Q8BRF7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Scfd1Q8BRF7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Scfd1Q8BRF7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Scfd1Q8BRF7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.92■■□□□ 1.26
Scfd1Q8BRF7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Scfd1Q8BRF7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Scfd1Q8BRF7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms