Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp1Q8BJQ2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp1Q8BJQ2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp1Q8BJQ2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp1Q8BJQ2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp1Q8BJQ2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
Usp1Q8BJQ2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Usp1Q8BJQ2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp1Q8BJQ2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp1Q8BJQ2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp1Q8BJQ2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp1Q8BJQ2 Gm7291-201ENSMUST00000199147 382 ntBASIC21.22■□□□□ 0.99
Usp1Q8BJQ2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp1Q8BJQ2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Usp1Q8BJQ2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Usp1Q8BJQ2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp1Q8BJQ2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp1Q8BJQ2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.2■□□□□ 0.98
Usp1Q8BJQ2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Gm42569-201ENSMUST00000200539 472 ntBASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp1Q8BJQ2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Gm27405-201ENSMUST00000184201 112 ntBASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp1Q8BJQ2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Gm42642-201ENSMUST00000200683 355 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms