Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pif1Q80SX8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pif1Q80SX8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pif1Q80SX8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.44■□□□□ 0.54
Pif1Q80SX8 Gm27405-201ENSMUST00000184201 112 ntBASIC18.44■□□□□ 0.54
Pif1Q80SX8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pif1Q80SX8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.44■□□□□ 0.54
Pif1Q80SX8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pif1Q80SX8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pif1Q80SX8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pif1Q80SX8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pif1Q80SX8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pif1Q80SX8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pif1Q80SX8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pif1Q80SX8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.43■□□□□ 0.54
Pif1Q80SX8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.43■□□□□ 0.54
Pif1Q80SX8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pif1Q80SX8 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.43■□□□□ 0.54
Pif1Q80SX8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pif1Q80SX8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pif1Q80SX8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.42■□□□□ 0.54
Pif1Q80SX8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pif1Q80SX8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pif1Q80SX8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.42■□□□□ 0.54
Pif1Q80SX8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.42■□□□□ 0.54
Pif1Q80SX8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.42■□□□□ 0.54
Pif1Q80SX8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.42■□□□□ 0.54
Pif1Q80SX8 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.42■□□□□ 0.54
Pif1Q80SX8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pif1Q80SX8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pif1Q80SX8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pif1Q80SX8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.42■□□□□ 0.54
Pif1Q80SX8 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.42■□□□□ 0.54
Pif1Q80SX8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pif1Q80SX8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pif1Q80SX8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pif1Q80SX8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pif1Q80SX8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.4■□□□□ 0.54
Pif1Q80SX8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pif1Q80SX8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pif1Q80SX8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pif1Q80SX8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pif1Q80SX8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.39■□□□□ 0.53
Pif1Q80SX8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pif1Q80SX8 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.39■□□□□ 0.53
Pif1Q80SX8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.39■□□□□ 0.53
Pif1Q80SX8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pif1Q80SX8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.38■□□□□ 0.53
Pif1Q80SX8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.38■□□□□ 0.53
Pif1Q80SX8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pif1Q80SX8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms