Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lsm8Q6ZWM4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Lsm8Q6ZWM4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Lsm8Q6ZWM4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.05■□□□□ 0.96
Lsm8Q6ZWM4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Lsm8Q6ZWM4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm8Q6ZWM4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm8Q6ZWM4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm8Q6ZWM4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm8Q6ZWM4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lsm8Q6ZWM4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Lsm8Q6ZWM4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Lsm8Q6ZWM4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm8Q6ZWM4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm8Q6ZWM4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.04■□□□□ 0.96
Lsm8Q6ZWM4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm8Q6ZWM4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm8Q6ZWM4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm8Q6ZWM4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lsm8Q6ZWM4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm8Q6ZWM4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Lsm8Q6ZWM4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21■□□□□ 0.95
Lsm8Q6ZWM4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm8Q6ZWM4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm8Q6ZWM4 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.99■□□□□ 0.95
Lsm8Q6ZWM4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm8Q6ZWM4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lsm8Q6ZWM4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Lsm8Q6ZWM4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm8Q6ZWM4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm8Q6ZWM4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm8Q6ZWM4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm8Q6ZWM4 Gm9847-201ENSMUST00000052528 599 ntBASIC20.98■□□□□ 0.95
Lsm8Q6ZWM4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm8Q6ZWM4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.98■□□□□ 0.95
Lsm8Q6ZWM4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm8Q6ZWM4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm8Q6ZWM4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm8Q6ZWM4 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.97■□□□□ 0.95
Lsm8Q6ZWM4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm8Q6ZWM4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm8Q6ZWM4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm8Q6ZWM4 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.97■□□□□ 0.95
Lsm8Q6ZWM4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm8Q6ZWM4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms