Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtl3Q6P1Y1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtl3Q6P1Y1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.67■□□□□ 0.9
Rtl3Q6P1Y1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rtl3Q6P1Y1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl3Q6P1Y1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl3Q6P1Y1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rtl3Q6P1Y1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtl3Q6P1Y1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rtl3Q6P1Y1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.64■□□□□ 0.89
Rtl3Q6P1Y1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rtl3Q6P1Y1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtl3Q6P1Y1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtl3Q6P1Y1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rtl3Q6P1Y1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rtl3Q6P1Y1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtl3Q6P1Y1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rtl3Q6P1Y1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtl3Q6P1Y1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rtl3Q6P1Y1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Mir6236-201ENSMUST00000184437 123 ntBASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtl3Q6P1Y1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Gm8495-201ENSMUST00000188740 694 ntBASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.6■□□□□ 0.89
Rtl3Q6P1Y1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Gm6139-201ENSMUST00000079261 882 ntBASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl3Q6P1Y1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rtl3Q6P1Y1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtl3Q6P1Y1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rtl3Q6P1Y1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.58■□□□□ 0.89
Rtl3Q6P1Y1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.58■□□□□ 0.89
Rtl3Q6P1Y1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtl3Q6P1Y1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtl3Q6P1Y1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtl3Q6P1Y1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtl3Q6P1Y1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl3Q6P1Y1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms