Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shroom1Q5SX79 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Shroom1Q5SX79 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.3■■□□□ 1
Shroom1Q5SX79 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shroom1Q5SX79 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.3■■□□□ 1
Shroom1Q5SX79 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.3■■□□□ 1
Shroom1Q5SX79 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shroom1Q5SX79 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.3■■□□□ 1
Shroom1Q5SX79 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Shroom1Q5SX79 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shroom1Q5SX79 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Shroom1Q5SX79 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.29■■□□□ 1
Shroom1Q5SX79 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shroom1Q5SX79 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Shroom1Q5SX79 Gm26833-201ENSMUST00000180899 440 ntBASIC21.29■■□□□ 1
Shroom1Q5SX79 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shroom1Q5SX79 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Shroom1Q5SX79 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shroom1Q5SX79 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
Shroom1Q5SX79 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.28■■□□□ 1
Shroom1Q5SX79 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Shroom1Q5SX79 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shroom1Q5SX79 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Shroom1Q5SX79 Gm5874-201ENSMUST00000096101 508 ntBASIC21.28■■□□□ 1
Shroom1Q5SX79 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Shroom1Q5SX79 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shroom1Q5SX79 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shroom1Q5SX79 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shroom1Q5SX79 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shroom1Q5SX79 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shroom1Q5SX79 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shroom1Q5SX79 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.27■■□□□ 1
Shroom1Q5SX79 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shroom1Q5SX79 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shroom1Q5SX79 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Shroom1Q5SX79 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shroom1Q5SX79 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shroom1Q5SX79 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.26■□□□□ 0.99
Shroom1Q5SX79 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shroom1Q5SX79 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shroom1Q5SX79 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.24■□□□□ 0.99
Shroom1Q5SX79 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.24■□□□□ 0.99
Shroom1Q5SX79 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shroom1Q5SX79 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shroom1Q5SX79 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Gm43060-201ENSMUST00000200621 289 ntBASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Shroom1Q5SX79 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shroom1Q5SX79 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.21■□□□□ 0.99
Shroom1Q5SX79 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Shroom1Q5SX79 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.21■□□□□ 0.99
Shroom1Q5SX79 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Shroom1Q5SX79 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Shroom1Q5SX79 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shroom1Q5SX79 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Shroom1Q5SX79 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Shroom1Q5SX79 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shroom1Q5SX79 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shroom1Q5SX79 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shroom1Q5SX79 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.2■□□□□ 0.98
Shroom1Q5SX79 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shroom1Q5SX79 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shroom1Q5SX79 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shroom1Q5SX79 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shroom1Q5SX79 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.19■□□□□ 0.98
Shroom1Q5SX79 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms