Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7d-3Q5R1I1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav7d-3Q5R1I1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7d-3Q5R1I1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7d-3Q5R1I1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav7d-3Q5R1I1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7d-3Q5R1I1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Gm40881-201ENSMUST00000223397 166 ntBASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms