Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.23■□□□□ 0.99
Trim43aQ3TL54 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43aQ3TL54 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43aQ3TL54 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43aQ3TL54 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim43aQ3TL54 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43aQ3TL54 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43aQ3TL54 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43aQ3TL54 Gm15546-201ENSMUST00000122095 826 ntBASIC21.22■□□□□ 0.99
Trim43aQ3TL54 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim43aQ3TL54 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim43aQ3TL54 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim43aQ3TL54 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43aQ3TL54 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43aQ3TL54 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim43aQ3TL54 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.21■□□□□ 0.99
Trim43aQ3TL54 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43aQ3TL54 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim43aQ3TL54 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43aQ3TL54 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim43aQ3TL54 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trim43aQ3TL54 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43aQ3TL54 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim43aQ3TL54 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim43aQ3TL54 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43aQ3TL54 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim43aQ3TL54 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim43aQ3TL54 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43aQ3TL54 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43aQ3TL54 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim43aQ3TL54 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.19■□□□□ 0.98
Trim43aQ3TL54 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Trim43aQ3TL54 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim43aQ3TL54 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim43aQ3TL54 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim43aQ3TL54 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim43aQ3TL54 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim43aQ3TL54 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim43aQ3TL54 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim43aQ3TL54 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim43aQ3TL54 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim43aQ3TL54 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim43aQ3TL54 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim43aQ3TL54 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim43aQ3TL54 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.14■□□□□ 0.97
Trim43aQ3TL54 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trim43aQ3TL54 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43aQ3TL54 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Gm13238-201ENSMUST00000117655 780 ntBASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trim43aQ3TL54 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms