Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.54■□□□□ 0.56
Cacna1aP97445 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.54■□□□□ 0.56
Cacna1aP97445 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.54■□□□□ 0.56
Cacna1aP97445 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cacna1aP97445 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1aP97445 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1aP97445 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1aP97445 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.53■□□□□ 0.56
Cacna1aP97445 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1aP97445 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.53■□□□□ 0.56
Cacna1aP97445 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.53■□□□□ 0.56
Cacna1aP97445 Gm42778-201ENSMUST00000199644 553 ntBASIC18.53■□□□□ 0.56
Cacna1aP97445 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.53■□□□□ 0.56
Cacna1aP97445 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1aP97445 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1aP97445 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1aP97445 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.52■□□□□ 0.56
Cacna1aP97445 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1aP97445 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1aP97445 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cacna1aP97445 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cacna1aP97445 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1aP97445 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1aP97445 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1aP97445 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cacna1aP97445 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1aP97445 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1aP97445 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1aP97445 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1aP97445 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Cacna1aP97445 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1aP97445 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacna1aP97445 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacna1aP97445 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacna1aP97445 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cacna1aP97445 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.51■□□□□ 0.55
Cacna1aP97445 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacna1aP97445 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.51■□□□□ 0.55
Cacna1aP97445 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cacna1aP97445 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cacna1aP97445 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.5■□□□□ 0.55
Cacna1aP97445 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.5■□□□□ 0.55
Cacna1aP97445 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 Reep4-203ENSMUST00000226563 1444 ntBASIC18.5■□□□□ 0.55
Cacna1aP97445 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cacna1aP97445 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cacna1aP97445 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cacna1aP97445 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.49■□□□□ 0.55
Cacna1aP97445 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
Cacna1aP97445 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.49■□□□□ 0.55
Cacna1aP97445 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cacna1aP97445 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cacna1aP97445 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.48■□□□□ 0.55
Cacna1aP97445 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1aP97445 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1aP97445 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1aP97445 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1aP97445 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1aP97445 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1aP97445 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cacna1aP97445 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1aP97445 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1aP97445 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.47■□□□□ 0.55
Cacna1aP97445 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1aP97445 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cacna1aP97445 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1aP97445 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.47■□□□□ 0.55
Cacna1aP97445 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.47■□□□□ 0.55
Cacna1aP97445 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacna1aP97445 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1aP97445 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1aP97445 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cacna1aP97445 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacna1aP97445 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms