Protein–RNA interactions for Protein: P97291

Cdh8, Cadherin-8, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh8P97291 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cdh8P97291 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cdh8P97291 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh8P97291 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh8P97291 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh8P97291 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh8P97291 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh8P97291 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh8P97291 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cdh8P97291 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh8P97291 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh8P97291 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cdh8P97291 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh8P97291 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh8P97291 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.23■□□□□ 0.99
Cdh8P97291 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh8P97291 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh8P97291 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh8P97291 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh8P97291 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.22■□□□□ 0.99
Cdh8P97291 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.22■□□□□ 0.99
Cdh8P97291 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.22■□□□□ 0.99
Cdh8P97291 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh8P97291 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh8P97291 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.21■□□□□ 0.99
Cdh8P97291 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh8P97291 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh8P97291 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh8P97291 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Cdh8P97291 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh8P97291 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdh8P97291 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh8P97291 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh8P97291 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh8P97291 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh8P97291 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh8P97291 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh8P97291 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh8P97291 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cdh8P97291 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh8P97291 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh8P97291 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh8P97291 Mir7075-201ENSMUST00000184187 82 ntBASIC21.19■□□□□ 0.98
Cdh8P97291 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh8P97291 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh8P97291 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh8P97291 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Cdh8P97291 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh8P97291 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh8P97291 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh8P97291 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh8P97291 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh8P97291 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Cdh8P97291 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.18■□□□□ 0.98
Cdh8P97291 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cdh8P97291 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
Cdh8P97291 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh8P97291 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh8P97291 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh8P97291 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh8P97291 Gm12251-201ENSMUST00000117893 792 ntBASIC21.17■□□□□ 0.98
Cdh8P97291 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Cdh8P97291 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cdh8P97291 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cdh8P97291 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cdh8P97291 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Cdh8P97291 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh8P97291 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.17■□□□□ 0.98
Cdh8P97291 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cdh8P97291 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cdh8P97291 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cdh8P97291 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cdh8P97291 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh8P97291 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh8P97291 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh8P97291 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.16■□□□□ 0.98
Cdh8P97291 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh8P97291 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms