Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Tubgcp3P58854 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tubgcp3P58854 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.42■□□□□ 0.86
Tubgcp3P58854 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.42■□□□□ 0.86
Tubgcp3P58854 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tubgcp3P58854 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubgcp3P58854 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubgcp3P58854 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubgcp3P58854 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubgcp3P58854 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tubgcp3P58854 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubgcp3P58854 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubgcp3P58854 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tubgcp3P58854 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.39■□□□□ 0.85
Tubgcp3P58854 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubgcp3P58854 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubgcp3P58854 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Tubgcp3P58854 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.38■□□□□ 0.85
Tubgcp3P58854 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubgcp3P58854 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.37■□□□□ 0.85
Tubgcp3P58854 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tubgcp3P58854 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.36■□□□□ 0.85
Tubgcp3P58854 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
Tubgcp3P58854 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tubgcp3P58854 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubgcp3P58854 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tubgcp3P58854 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
Tubgcp3P58854 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tubgcp3P58854 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubgcp3P58854 Gm43530-201ENSMUST00000195920 274 ntBASIC20.34■□□□□ 0.85
Tubgcp3P58854 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tubgcp3P58854 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tubgcp3P58854 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubgcp3P58854 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubgcp3P58854 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubgcp3P58854 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubgcp3P58854 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms