Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh5P55284 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh5P55284 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh5P55284 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh5P55284 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cdh5P55284 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cdh5P55284 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.37■□□□□ 0.69
Cdh5P55284 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cdh5P55284 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh5P55284 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh5P55284 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cdh5P55284 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh5P55284 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cdh5P55284 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cdh5P55284 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh5P55284 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.36■□□□□ 0.69
Cdh5P55284 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Cdh5P55284 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Cdh5P55284 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh5P55284 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdh5P55284 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh5P55284 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.36■□□□□ 0.69
Cdh5P55284 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh5P55284 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.35■□□□□ 0.69
Cdh5P55284 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.35■□□□□ 0.69
Cdh5P55284 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cdh5P55284 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh5P55284 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh5P55284 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdh5P55284 Gm22238-201ENSMUST00000175222 88 ntBASIC19.34■□□□□ 0.69
Cdh5P55284 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Cdh5P55284 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh5P55284 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh5P55284 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh5P55284 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh5P55284 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh5P55284 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh5P55284 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh5P55284 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.33■□□□□ 0.69
Cdh5P55284 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh5P55284 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Cdh5P55284 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cdh5P55284 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh5P55284 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh5P55284 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh5P55284 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.32■□□□□ 0.68
Cdh5P55284 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.32■□□□□ 0.68
Cdh5P55284 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh5P55284 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh5P55284 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh5P55284 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh5P55284 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Cdh5P55284 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh5P55284 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdh5P55284 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh5P55284 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cdh5P55284 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh5P55284 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh5P55284 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh5P55284 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cdh5P55284 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.31■□□□□ 0.68
Cdh5P55284 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh5P55284 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh5P55284 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh5P55284 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cdh5P55284 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Cdh5P55284 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdh5P55284 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cdh5P55284 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdh5P55284 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh5P55284 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh5P55284 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms