Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox2P48432 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox2P48432 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Sox2P48432 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox2P48432 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sox2P48432 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.73■□□□□ 0.59
Sox2P48432 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox2P48432 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox2P48432 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox2P48432 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox2P48432 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox2P48432 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox2P48432 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sox2P48432 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.73■□□□□ 0.59
Sox2P48432 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox2P48432 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox2P48432 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox2P48432 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox2P48432 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Sox2P48432 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.72■□□□□ 0.59
Sox2P48432 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sox2P48432 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sox2P48432 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox2P48432 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sox2P48432 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sox2P48432 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sox2P48432 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.71■□□□□ 0.59
Sox2P48432 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.71■□□□□ 0.59
Sox2P48432 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox2P48432 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.71■□□□□ 0.59
Sox2P48432 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox2P48432 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox2P48432 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox2P48432 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox2P48432 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.71■□□□□ 0.59
Sox2P48432 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox2P48432 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox2P48432 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox2P48432 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox2P48432 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox2P48432 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox2P48432 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.7■□□□□ 0.58
Sox2P48432 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.7■□□□□ 0.58
Sox2P48432 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox2P48432 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox2P48432 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox2P48432 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.69■□□□□ 0.58
Sox2P48432 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox2P48432 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sox2P48432 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.69■□□□□ 0.58
Sox2P48432 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox2P48432 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox2P48432 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox2P48432 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sox2P48432 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox2P48432 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.68■□□□□ 0.58
Sox2P48432 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox2P48432 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox2P48432 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox2P48432 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox2P48432 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox2P48432 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.68■□□□□ 0.58
Sox2P48432 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sox2P48432 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox2P48432 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox2P48432 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.67■□□□□ 0.58
Sox2P48432 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox2P48432 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.67■□□□□ 0.58
Sox2P48432 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox2P48432 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox2P48432 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
Sox2P48432 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sox2P48432 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox2P48432 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox2P48432 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.66■□□□□ 0.58
Sox2P48432 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Sox2P48432 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox2P48432 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox2P48432 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox2P48432 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox2P48432 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.65■□□□□ 0.58
Sox2P48432 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox2P48432 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sox2P48432 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Sox2P48432 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Sox2P48432 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox2P48432 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox2P48432 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox2P48432 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms