Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Fen1P39749 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Fen1P39749 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fen1P39749 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Fen1P39749 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fen1P39749 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Fen1P39749 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Fen1P39749 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Fen1P39749 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Fen1P39749 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fen1P39749 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Fen1P39749 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Fen1P39749 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.01■□□□□ 0.79
Fen1P39749 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.01■□□□□ 0.79
Fen1P39749 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Fen1P39749 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fen1P39749 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Fen1P39749 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Fen1P39749 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fen1P39749 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fen1P39749 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20■□□□□ 0.79
Fen1P39749 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Fen1P39749 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fen1P39749 Dapk1-207ENSMUST00000226059 5009 ntBASIC20■□□□□ 0.79
Fen1P39749 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fen1P39749 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20■□□□□ 0.79
Fen1P39749 Gm5131-201ENSMUST00000212776 1238 ntBASIC20■□□□□ 0.79
Fen1P39749 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fen1P39749 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20■□□□□ 0.79
Fen1P39749 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fen1P39749 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20■□□□□ 0.79
Fen1P39749 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.99■□□□□ 0.79
Fen1P39749 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.99■□□□□ 0.79
Fen1P39749 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.99■□□□□ 0.79
Fen1P39749 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.99■□□□□ 0.79
Fen1P39749 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fen1P39749 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fen1P39749 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fen1P39749 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fen1P39749 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fen1P39749 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fen1P39749 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fen1P39749 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fen1P39749 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fen1P39749 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fen1P39749 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.97■□□□□ 0.79
Fen1P39749 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Fen1P39749 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Fen1P39749 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Fen1P39749 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.97■□□□□ 0.79
Fen1P39749 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.97■□□□□ 0.79
Fen1P39749 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fen1P39749 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fen1P39749 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fen1P39749 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Fen1P39749 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Fen1P39749 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Fen1P39749 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.95■□□□□ 0.78
Fen1P39749 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fen1P39749 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Fen1P39749 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.94■□□□□ 0.78
Fen1P39749 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Fen1P39749 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.94■□□□□ 0.78
Fen1P39749 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fen1P39749 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms