Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RetP35546 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RetP35546 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.71■□□□□ 0.59
RetP35546 Gm6139-201ENSMUST00000079261 882 ntBASIC18.71■□□□□ 0.59
RetP35546 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RetP35546 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RetP35546 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RetP35546 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RetP35546 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RetP35546 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RetP35546 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.7■□□□□ 0.58
RetP35546 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.7■□□□□ 0.58
RetP35546 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RetP35546 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.69■□□□□ 0.58
RetP35546 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.69■□□□□ 0.58
RetP35546 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RetP35546 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RetP35546 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.68■□□□□ 0.58
RetP35546 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RetP35546 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RetP35546 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RetP35546 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.68■□□□□ 0.58
RetP35546 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RetP35546 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RetP35546 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.67■□□□□ 0.58
RetP35546 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RetP35546 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
RetP35546 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RetP35546 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RetP35546 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RetP35546 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.66■□□□□ 0.58
RetP35546 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.66■□□□□ 0.58
RetP35546 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RetP35546 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RetP35546 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.66■□□□□ 0.58
RetP35546 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RetP35546 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RetP35546 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RetP35546 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RetP35546 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RetP35546 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RetP35546 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RetP35546 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RetP35546 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RetP35546 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RetP35546 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RetP35546 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RetP35546 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RetP35546 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.65■□□□□ 0.58
RetP35546 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RetP35546 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.65■□□□□ 0.58
RetP35546 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RetP35546 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RetP35546 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.64■□□□□ 0.57
RetP35546 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RetP35546 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RetP35546 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.64■□□□□ 0.57
RetP35546 Gm43137-201ENSMUST00000198052 594 ntBASIC18.64■□□□□ 0.57
RetP35546 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RetP35546 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RetP35546 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RetP35546 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RetP35546 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RetP35546 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RetP35546 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RetP35546 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RetP35546 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RetP35546 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RetP35546 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RetP35546 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RetP35546 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RetP35546 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 161.1 ms