Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
NclP09405 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NclP09405 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
NclP09405 Smad6-203ENSMUST00000179458 273 ntBASIC29.76■■■□□ 2.35
NclP09405 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
NclP09405 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NclP09405 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
NclP09405 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
NclP09405 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
NclP09405 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
NclP09405 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NclP09405 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NclP09405 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
NclP09405 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
NclP09405 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC29.74■■■□□ 2.35
NclP09405 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NclP09405 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC29.73■■■□□ 2.35
NclP09405 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NclP09405 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NclP09405 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
NclP09405 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC29.73■■■□□ 2.35
NclP09405 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NclP09405 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
NclP09405 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NclP09405 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
NclP09405 Gm5874-201ENSMUST00000096101 508 ntBASIC29.72■■■□□ 2.35
NclP09405 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NclP09405 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NclP09405 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NclP09405 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NclP09405 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC29.71■■■□□ 2.35
NclP09405 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NclP09405 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NclP09405 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC29.71■■■□□ 2.35
NclP09405 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
NclP09405 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC29.7■■■□□ 2.35
NclP09405 Gm40848-201ENSMUST00000221998 324 ntBASIC29.7■■■□□ 2.35
NclP09405 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NclP09405 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
NclP09405 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NclP09405 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
NclP09405 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NclP09405 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
NclP09405 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NclP09405 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC29.69■■■□□ 2.34
NclP09405 Slc35b2-207ENSMUST00000226086 850 ntBASIC29.69■■■□□ 2.34
NclP09405 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
NclP09405 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NclP09405 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
NclP09405 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NclP09405 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NclP09405 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NclP09405 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
NclP09405 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
NclP09405 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NclP09405 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NclP09405 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NclP09405 AC165080.2-201ENSMUST00000217491 1530 ntBASIC29.66■■■□□ 2.34
NclP09405 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NclP09405 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NclP09405 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NclP09405 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
NclP09405 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC29.65■■■□□ 2.34
NclP09405 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
NclP09405 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
NclP09405 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
NclP09405 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
NclP09405 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
NclP09405 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
NclP09405 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
NclP09405 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
NclP09405 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
NclP09405 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NclP09405 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
NclP09405 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC29.63■■■□□ 2.33
NclP09405 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NclP09405 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC29.63■■■□□ 2.33
NclP09405 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NclP09405 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
NclP09405 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
NclP09405 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NclP09405 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NclP09405 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC29.62■■■□□ 2.33
NclP09405 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NclP09405 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
NclP09405 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NclP09405 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
NclP09405 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC29.61■■■□□ 2.33
NclP09405 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC29.61■■■□□ 2.33
NclP09405 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
NclP09405 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
NclP09405 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
NclP09405 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
NclP09405 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
NclP09405 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NclP09405 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NclP09405 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC29.6■■■□□ 2.33
NclP09405 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC29.6■■■□□ 2.33
NclP09405 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NclP09405 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms