Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CfdP03953 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CfdP03953 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.73■□□□□ 0.27
CfdP03953 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.73■□□□□ 0.27
CfdP03953 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CfdP03953 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.72■□□□□ 0.27
CfdP03953 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CfdP03953 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CfdP03953 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CfdP03953 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CfdP03953 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CfdP03953 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CfdP03953 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CfdP03953 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CfdP03953 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CfdP03953 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CfdP03953 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CfdP03953 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.7■□□□□ 0.26
CfdP03953 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CfdP03953 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.7■□□□□ 0.26
CfdP03953 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.7■□□□□ 0.26
CfdP03953 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CfdP03953 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CfdP03953 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CfdP03953 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CfdP03953 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CfdP03953 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CfdP03953 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CfdP03953 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CfdP03953 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.68■□□□□ 0.26
CfdP03953 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CfdP03953 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CfdP03953 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CfdP03953 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CfdP03953 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.67■□□□□ 0.26
CfdP03953 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.67■□□□□ 0.26
CfdP03953 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CfdP03953 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CfdP03953 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CfdP03953 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CfdP03953 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.66■□□□□ 0.26
CfdP03953 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CfdP03953 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CfdP03953 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.66■□□□□ 0.26
CfdP03953 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CfdP03953 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 180 ms