Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ttc3O88196 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Ttc3O88196 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ttc3O88196 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ttc3O88196 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ttc3O88196 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ttc3O88196 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ttc3O88196 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ttc3O88196 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.23■□□□□ 0.99
Ttc3O88196 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ttc3O88196 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ttc3O88196 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.23■□□□□ 0.99
Ttc3O88196 Gm10033-202ENSMUST00000211874 928 ntBASIC21.23■□□□□ 0.99
Ttc3O88196 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ttc3O88196 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ttc3O88196 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ttc3O88196 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ttc3O88196 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.22■□□□□ 0.99
Ttc3O88196 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ttc3O88196 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ttc3O88196 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.22■□□□□ 0.99
Ttc3O88196 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ttc3O88196 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ttc3O88196 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ttc3O88196 Gm11421-201ENSMUST00000122124 294 ntBASIC21.21■□□□□ 0.99
Ttc3O88196 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ttc3O88196 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ttc3O88196 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ttc3O88196 Gm10849-201ENSMUST00000100397 618 ntBASIC21.21■□□□□ 0.99
Ttc3O88196 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.21■□□□□ 0.99
Ttc3O88196 Mir6236-201ENSMUST00000184437 123 ntBASIC21.21■□□□□ 0.99
Ttc3O88196 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.21■□□□□ 0.99
Ttc3O88196 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ttc3O88196 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc3O88196 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc3O88196 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ttc3O88196 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc3O88196 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc3O88196 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc3O88196 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ttc3O88196 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ttc3O88196 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ttc3O88196 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.19■□□□□ 0.98
Ttc3O88196 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.19■□□□□ 0.98
Ttc3O88196 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ttc3O88196 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.18■□□□□ 0.98
Ttc3O88196 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Ttc3O88196 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc3O88196 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc3O88196 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc3O88196 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc3O88196 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ttc3O88196 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc3O88196 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.17■□□□□ 0.98
Ttc3O88196 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Ttc3O88196 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc3O88196 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc3O88196 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc3O88196 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.17■□□□□ 0.98
Ttc3O88196 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.17■□□□□ 0.98
Ttc3O88196 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ttc3O88196 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc3O88196 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc3O88196 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ttc3O88196 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ttc3O88196 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ttc3O88196 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.16■□□□□ 0.98
Ttc3O88196 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc3O88196 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc3O88196 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Ttc3O88196 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc3O88196 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc3O88196 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc3O88196 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ttc3O88196 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ttc3O88196 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ttc3O88196 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.14■□□□□ 0.98
Ttc3O88196 Gm27405-201ENSMUST00000184201 112 ntBASIC21.14■□□□□ 0.98
Ttc3O88196 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc3O88196 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.14■□□□□ 0.97
Ttc3O88196 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc3O88196 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ttc3O88196 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc3O88196 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc3O88196 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ttc3O88196 Gm7291-201ENSMUST00000199147 382 ntBASIC21.14■□□□□ 0.97
Ttc3O88196 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.14■□□□□ 0.97
Ttc3O88196 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc3O88196 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms