Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dkk1O54908 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Dkk1O54908 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dkk1O54908 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.31■□□□□ 0.36
Dkk1O54908 Gm28877-201ENSMUST00000191349 604 ntBASIC17.31■□□□□ 0.36
Dkk1O54908 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.31■□□□□ 0.36
Dkk1O54908 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dkk1O54908 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dkk1O54908 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Dkk1O54908 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dkk1O54908 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.3■□□□□ 0.36
Dkk1O54908 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.3■□□□□ 0.36
Dkk1O54908 Gm44953-201ENSMUST00000208745 1286 ntBASIC17.3■□□□□ 0.36
Dkk1O54908 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Dkk1O54908 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dkk1O54908 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Dkk1O54908 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Dkk1O54908 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dkk1O54908 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Dkk1O54908 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Dkk1O54908 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dkk1O54908 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dkk1O54908 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dkk1O54908 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Dkk1O54908 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.28■□□□□ 0.36
Dkk1O54908 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.28■□□□□ 0.36
Dkk1O54908 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.28■□□□□ 0.36
Dkk1O54908 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dkk1O54908 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dkk1O54908 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.27■□□□□ 0.36
Dkk1O54908 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Dkk1O54908 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Dkk1O54908 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dkk1O54908 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.27■□□□□ 0.36
Dkk1O54908 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Dkk1O54908 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Dkk1O54908 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Dkk1O54908 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Dkk1O54908 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Dkk1O54908 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dkk1O54908 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Dkk1O54908 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Dkk1O54908 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.26■□□□□ 0.35
Dkk1O54908 Gm43974-201ENSMUST00000205080 684 ntBASIC17.26■□□□□ 0.35
Dkk1O54908 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dkk1O54908 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Dkk1O54908 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dkk1O54908 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Dkk1O54908 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.25■□□□□ 0.35
Dkk1O54908 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Dkk1O54908 Gm22993-201ENSMUST00000175423 254 ntBASIC17.25■□□□□ 0.35
Dkk1O54908 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.25■□□□□ 0.35
Dkk1O54908 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.25■□□□□ 0.35
Dkk1O54908 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.25■□□□□ 0.35
Dkk1O54908 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Dkk1O54908 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Dkk1O54908 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dkk1O54908 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dkk1O54908 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dkk1O54908 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dkk1O54908 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Dkk1O54908 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Dkk1O54908 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Dkk1O54908 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Dkk1O54908 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Dkk1O54908 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Dkk1O54908 Gm37744-201ENSMUST00000194616 1590 ntBASIC17.23■□□□□ 0.35
Dkk1O54908 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.23■□□□□ 0.35
Dkk1O54908 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.23■□□□□ 0.35
Dkk1O54908 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dkk1O54908 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC17.23■□□□□ 0.35
Dkk1O54908 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Dkk1O54908 Mir6236-201ENSMUST00000184437 123 ntBASIC17.23■□□□□ 0.35
Dkk1O54908 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.23■□□□□ 0.35
Dkk1O54908 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.23■□□□□ 0.35
Dkk1O54908 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dkk1O54908 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dkk1O54908 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dkk1O54908 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dkk1O54908 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.23■□□□□ 0.35
Dkk1O54908 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms