Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.33■□□□□ 0.68
Colca2F8VPY8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Colca2F8VPY8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Colca2F8VPY8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.32■□□□□ 0.68
Colca2F8VPY8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Colca2F8VPY8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Gm20760-201ENSMUST00000179197 648 ntBASIC19.32■□□□□ 0.68
Colca2F8VPY8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Colca2F8VPY8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Colca2F8VPY8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Colca2F8VPY8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.31■□□□□ 0.68
Colca2F8VPY8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.31■□□□□ 0.68
Colca2F8VPY8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Colca2F8VPY8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Colca2F8VPY8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Colca2F8VPY8 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.3■□□□□ 0.68
Colca2F8VPY8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.3■□□□□ 0.68
Colca2F8VPY8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Colca2F8VPY8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Colca2F8VPY8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Colca2F8VPY8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Colca2F8VPY8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Colca2F8VPY8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Colca2F8VPY8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Colca2F8VPY8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Colca2F8VPY8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Colca2F8VPY8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Colca2F8VPY8 Gm22240-201ENSMUST00000175225 82 ntBASIC19.29■□□□□ 0.68
Colca2F8VPY8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.29■□□□□ 0.68
Colca2F8VPY8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Colca2F8VPY8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Colca2F8VPY8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Colca2F8VPY8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Colca2F8VPY8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.28■□□□□ 0.68
Colca2F8VPY8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.28■□□□□ 0.68
Colca2F8VPY8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Colca2F8VPY8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Colca2F8VPY8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Colca2F8VPY8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Colca2F8VPY8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Colca2F8VPY8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Colca2F8VPY8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Colca2F8VPY8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Colca2F8VPY8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Colca2F8VPY8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Colca2F8VPY8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Colca2F8VPY8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Colca2F8VPY8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Colca2F8VPY8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Colca2F8VPY8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Colca2F8VPY8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.27■□□□□ 0.67
Colca2F8VPY8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Colca2F8VPY8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Colca2F8VPY8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Colca2F8VPY8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Colca2F8VPY8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Colca2F8VPY8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Colca2F8VPY8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Colca2F8VPY8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Colca2F8VPY8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.26■□□□□ 0.67
Colca2F8VPY8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Colca2F8VPY8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Colca2F8VPY8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Colca2F8VPY8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Colca2F8VPY8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Colca2F8VPY8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Colca2F8VPY8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Colca2F8VPY8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Colca2F8VPY8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Colca2F8VPY8 Gm12527-201ENSMUST00000117967 564 ntBASIC19.25■□□□□ 0.67
Colca2F8VPY8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.25■□□□□ 0.67
Colca2F8VPY8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.25■□□□□ 0.67
Colca2F8VPY8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Colca2F8VPY8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Colca2F8VPY8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Colca2F8VPY8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Colca2F8VPY8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Colca2F8VPY8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Colca2F8VPY8 Gm8520-201ENSMUST00000186517 868 ntBASIC19.23■□□□□ 0.67
Colca2F8VPY8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.23■□□□□ 0.67
Colca2F8VPY8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Colca2F8VPY8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Colca2F8VPY8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms