Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Gm13146-201ENSMUST00000118508 780 ntBASIC9.93□□□□□ -0.82
Rnf213E9Q555 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Gm10819-201ENSMUST00000099988 561 ntBASIC9.93□□□□□ -0.82
Rnf213E9Q555 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Rnf213E9Q555 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rnf213E9Q555 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rnf213E9Q555 Gm10655-201ENSMUST00000098658 1397 ntBASIC9.92□□□□□ -0.82
Rnf213E9Q555 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rnf213E9Q555 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rnf213E9Q555 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rnf213E9Q555 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rnf213E9Q555 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC9.92□□□□□ -0.82
Rnf213E9Q555 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rnf213E9Q555 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rnf213E9Q555 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rnf213E9Q555 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf213E9Q555 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf213E9Q555 CT030146.1-201ENSMUST00000220919 217 ntBASIC9.9□□□□□ -0.82
Rnf213E9Q555 Gm6365-201ENSMUST00000054711 744 ntBASIC9.9□□□□□ -0.82
Rnf213E9Q555 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Rnf213E9Q555 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf213E9Q555 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf213E9Q555 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.9□□□□□ -0.83
Rnf213E9Q555 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Rnf213E9Q555 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC9.9□□□□□ -0.83
Rnf213E9Q555 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Rnf213E9Q555 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Gm6420-201ENSMUST00000193885 723 ntBASIC9.89□□□□□ -0.83
Rnf213E9Q555 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC9.89□□□□□ -0.83
Rnf213E9Q555 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf213E9Q555 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.88□□□□□ -0.83
Rnf213E9Q555 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Rnf213E9Q555 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms