Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otud4B2RRE7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Otud4B2RRE7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Otud4B2RRE7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Otud4B2RRE7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.85■□□□□ 0.61
Otud4B2RRE7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Otud4B2RRE7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Otud4B2RRE7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Otud4B2RRE7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Otud4B2RRE7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Otud4B2RRE7 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.85■□□□□ 0.61
Otud4B2RRE7 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.85■□□□□ 0.61
Otud4B2RRE7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Otud4B2RRE7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Otud4B2RRE7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.84■□□□□ 0.61
Otud4B2RRE7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.84■□□□□ 0.61
Otud4B2RRE7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.84■□□□□ 0.61
Otud4B2RRE7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Otud4B2RRE7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Otud4B2RRE7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Otud4B2RRE7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Otud4B2RRE7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Otud4B2RRE7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Otud4B2RRE7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.83■□□□□ 0.6
Otud4B2RRE7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Otud4B2RRE7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.83■□□□□ 0.6
Otud4B2RRE7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Otud4B2RRE7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.82■□□□□ 0.6
Otud4B2RRE7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.82■□□□□ 0.6
Otud4B2RRE7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Otud4B2RRE7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.81■□□□□ 0.6
Otud4B2RRE7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Otud4B2RRE7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud4B2RRE7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud4B2RRE7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Otud4B2RRE7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Otud4B2RRE7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud4B2RRE7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otud4B2RRE7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otud4B2RRE7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otud4B2RRE7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Otud4B2RRE7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Otud4B2RRE7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otud4B2RRE7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.79■□□□□ 0.6
Otud4B2RRE7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Otud4B2RRE7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Otud4B2RRE7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.78■□□□□ 0.6
Otud4B2RRE7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.78■□□□□ 0.6
Otud4B2RRE7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Otud4B2RRE7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otud4B2RRE7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.77■□□□□ 0.6
Otud4B2RRE7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otud4B2RRE7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms