Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh2d4bA6X942 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Sh2d4bA6X942 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh2d4bA6X942 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sh2d4bA6X942 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.36■■□□□ 1.01
Sh2d4bA6X942 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sh2d4bA6X942 Gm26571-201ENSMUST00000181399 666 ntBASIC21.36■■□□□ 1.01
Sh2d4bA6X942 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh2d4bA6X942 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh2d4bA6X942 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh2d4bA6X942 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sh2d4bA6X942 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Gm12251-201ENSMUST00000117893 792 ntBASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Gm43060-201ENSMUST00000200621 289 ntBASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sh2d4bA6X942 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Gm42642-201ENSMUST00000200683 355 ntBASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh2d4bA6X942 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh2d4bA6X942 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.33■■□□□ 1
Sh2d4bA6X942 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sh2d4bA6X942 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Sh2d4bA6X942 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh2d4bA6X942 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh2d4bA6X942 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sh2d4bA6X942 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh2d4bA6X942 Gm10849-201ENSMUST00000100397 618 ntBASIC21.32■■□□□ 1
Sh2d4bA6X942 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sh2d4bA6X942 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh2d4bA6X942 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh2d4bA6X942 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh2d4bA6X942 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Sh2d4bA6X942 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh2d4bA6X942 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.31■■□□□ 1
Sh2d4bA6X942 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.31■■□□□ 1
Sh2d4bA6X942 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.31■■□□□ 1
Sh2d4bA6X942 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh2d4bA6X942 Gm7143-201ENSMUST00000222811 859 ntBASIC21.31■■□□□ 1
Sh2d4bA6X942 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh2d4bA6X942 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.31■■□□□ 1
Sh2d4bA6X942 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sh2d4bA6X942 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh2d4bA6X942 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh2d4bA6X942 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.31■■□□□ 1
Sh2d4bA6X942 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh2d4bA6X942 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh2d4bA6X942 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sh2d4bA6X942 Gm37179-201ENSMUST00000194862 823 ntBASIC21.3■■□□□ 1
Sh2d4bA6X942 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2d4bA6X942 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2d4bA6X942 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Sh2d4bA6X942 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh2d4bA6X942 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2d4bA6X942 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2d4bA6X942 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2d4bA6X942 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.29■■□□□ 1
Sh2d4bA6X942 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.29■■□□□ 1
Sh2d4bA6X942 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2d4bA6X942 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh2d4bA6X942 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sh2d4bA6X942 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sh2d4bA6X942 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh2d4bA6X942 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sh2d4bA6X942 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.28■■□□□ 1
Sh2d4bA6X942 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sh2d4bA6X942 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.28■■□□□ 1
Sh2d4bA6X942 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.28■■□□□ 1
Sh2d4bA6X942 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh2d4bA6X942 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Sh2d4bA6X942 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sh2d4bA6X942 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh2d4bA6X942 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh2d4bA6X942 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.27■■□□□ 1
Sh2d4bA6X942 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms