Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.6■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Gm43017-201ENSMUST00000198296 752 ntBASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.58■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl9-ps6A0A140T8T4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl9-ps6A0A140T8T4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpl9-ps6A0A140T8T4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.56■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl9-ps6A0A140T8T4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.52■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl9-ps6A0A140T8T4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl9-ps6A0A140T8T4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 491 ms