Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Gm8495-201ENSMUST00000188740 694 ntBASIC20.19■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Gm43060-201ENSMUST00000200621 289 ntBASIC20.19■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.16■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.15■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.15■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Igkv5-39A0A0G2JDV4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.13■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-39A0A0G2JDV4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.13■□□□□ 0.81
Igkv5-39A0A0G2JDV4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.11■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Gm11421-201ENSMUST00000122124 294 ntBASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-39A0A0G2JDV4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms