Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-7A0A075B6B0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-7A0A075B6B0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-7A0A075B6B0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Gm15039-201ENSMUST00000118914 875 ntBASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-7A0A075B6B0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-7A0A075B6B0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-7A0A075B6B0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6d-7A0A075B6B0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6d-7A0A075B6B0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6d-7A0A075B6B0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav6d-7A0A075B6B0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav6d-7A0A075B6B0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-7A0A075B6B0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-7A0A075B6B0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-7A0A075B6B0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-7A0A075B6B0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-7A0A075B6B0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 276.4 ms